BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B07LP1|AL428333
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1781 377 e-104
>3x_Contig1781
Length = 20717
Score = 377 bits (182), Expect = e-104
Identities = 335/374 (89%), Gaps = 18/374 (4%)
Strand = Plus / Minus
Query: 106 tattactttagagcatcatcatataaatatmmtccctttcgtcagtgatatgwgttcttc 165
|||||||||||||||||||||||||||||| || |||| || |||||| || |||||||
Sbjct: 10694 tattactttagagcatcatcatataaatatactctcttt-gt-agtgat-tgtgttcttc 10638
Query: 166 aacggcatgctgttgatcccaaatgatcatcttatgcgaamytgaaccagtccggcaatg 225
||||||||||||||||||||||||| || |||| || ||| ||||||||| ||||||||
Sbjct: 10637 aacggcatgctgttgatcccaaatg-tc-tctt-tg-gaacttgaaccagttcggcaatg 10582
Query: 226 cctcwtcagtggggactccgattagaaatatgcgtytttaamgttcgatgcctgatagtr 285
|||| |||||||||||||||||| |||| |||||| ||||| |||||||||||||||||
Sbjct: 10581 cctcttcagtggggactccgatt-gaaa-atgcgtttttaacgttcgatgcctgatagta 10524
Query: 286 ggtgtackcattgcgttgctctctgtgcttgaatgccaatactgatatctgtttctcgcm 345
||||||| ||||||||| |||||| || ||||||||||| || |||||||||||| ||
Sbjct: 10523 ggtgtactcattgcgtt-ctctct-tg-ttgaatgccaa-ac-gatatctgtttc-cg-a 10471
Query: 346 aaatgcctaatgcagacctggagtgkttkatcggaagctcatgkgccgtttgcatcctct 405
||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||
Sbjct: 10470 aaatgcctaatgcagacctggagtgttttatcggaagctcatgttcc-tttgcatcctct 10412
Query: 406 tctggttwcagwwccatcgtatggatcatgctcatcatgtgcygaggtaactccggaggc 465
||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10411 tctggtttcagttccatcgtatggatcatgctcatcatgtgctgaggtaactccggaggc 10352
Query: 466 atggactagatcag 479
||||| ||||||||
Sbjct: 10351 atgga-tagatcag 10339
Score = 139 bits (67), Expect = 1e-32
Identities = 81/87 (93%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 1 gatcaagaatttaatcgtgcttacctttattcacaacctttctattttgaaggccagaaa 60
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 10789 gatcaagaatttaatcgttcttacctt-attcacaacctttctattttgaaggccagaaa 10731
Query: 61 cagtaaycarccgtgkgtctgtktttg 87
|||||| || ||||| |||||| ||||
Sbjct: 10730 cagtaaccagccgtgtgtctgtgtttg 10704
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3269
Number of Sequences: 1807
Number of extensions: 3269
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (99.9 bits)